DiSNPindel

[PMID:26498606] [BMC Bioinformatics]

DiSNPindel: improved intra-individual SNP and InDel detection in direct amplicon sequencing of a diploid

“Neither reference sequence nor additional sample was required.” “used simulated data to train Levenberg-Marquardt (LM) algorithm based back-propagation neural networks (BPNN) for intra-individual SNP diagnosis and also used real trace data to test the performance of the trained algorithm.” “is a stand-alone package programmed in Matlab R2011b and LabWindows/CVI 9.0. It runs on Windows platform and can deal with multiple traces (.ab1 and/or .scf files)”. Gonna to give it a try, find a Windows PC first.

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