VariantBam

[PMID:27153727] [Bioinformatics]

VariantBam: filtering and profiling of next-generational sequencing data using region-specific rules

A BAM filter tool, “a flexible framework for extracting sequencing reads or read-pairs that satisfy combinations of rules, defined by any number of genomic intervals or variant sites.” More than 50% faster than BamTools filter.

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