CARGO

[PMID:27131376] [Nucleic Acids Research]

CARGO: effective format-free compressed storage of genomic information

“a high-level framework to automatically generate software systems optimized for the compressed storage of arbitrary types of large genomic data collections. Straightforward applications of our approach to FASTQ and SAM archives require a few lines of code, produce solutions that match and sometimes outperform specialized format-tailored compressors and scale well to multi-TB datasets.”

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