JunctionSeq

[PMID:27257077] [Nucleic Acids Research]

Detection and visualization of differential splicing in RNA-Seq data with JunctionSeq

JunctionSeq is capable of detecting differential usage of novel splice junctions without the need for an additional isoform assembly step, greatly improving performance when the available transcript annotation is flawed or incomplete. JunctionSeq also provides a powerful and streamlined visualization toolset that allows bioinformaticians to quickly and intuitively interpret their results.”

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