recount2

[PMID:28288103] [Nature Biotechnology]

Reproducible RNA-seq analysis using recount2

“The recount2 resource summarizes expression data for genes, exons, exon–exon splice junctions and base-level coverage.” “The recount2 pipeline can be used for querying, downloading and analyzing large-scale human RNA-seq datasets across more than 70,000 samples, including all of GTEx, TCGA and the SRA. ” Work from Ben Langmead.

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